Ep. 42: The Autobots assault Atlantis while Coby pilots Scrapmetal and teams explore underground tunnels.

The Autobots attack Atlantis, prompting Starscream to deploy Sideways. In the cargo hold, Bud, Reverb, and Jolt encounter Scrapmetal, piloted by Coby. Soundwave removes Sideways from combat as Starscream redirects engine power to weapons. Quickmix traps Starscream with instant cement. On Ogygia, Coby demonstrates his drone suit, which lacks weapon systems for safety. Optimus awards the suit an Autobot insignia. Galvatron orders Decepticons to locate the Key. The Autobots divide into four teams to explore four underground tunnels, with Team 4 blocked. Team 4 discovers an underground city with a holographic sky. Ransack and Crumplezone capture Jolt. Coby intervenes, trapping the captors with cement. Evac saves Jolt from Crumplezone, and Optimus defeats the pair using Metroplex's axe.
Episodes
- Ep. 38 · Ambitions clash as Soundwave locates the Giant Planet while Starscream grows to planetary size
- Ep. 39 · Autobots navigate a dangerous space-time tunnel while evading the legendary Atlantis ship.
- Ep. 40 · Autobots travel to Gigantion and meet Metroplex while Menasor joins Megatron
- Ep. 41 · Galvatron's descent and the Autobots' discovery of Atlantis in Ogygia
- Ep. 42 · The Autobots assault Atlantis while Coby pilots Scrapmetal and teams explore underground tunnels.
- Ep. 43 · Lori confronts Thunderblast while Jetfire battles Thundercracker and Scourge fights Override.
- Ep. 44 · The Secret of Planet X
- Ep. 45 · Scourge hesitates after battle while Bud and Mini-cons explore abandoned Microcity.
- Ep. 46 · Starscream escapes Atlantis while Autobots face Galvatron and Menasor on Lemuria.