Ep. 22: Ayato dan Quon menghadapi Ixtli sementara Makoto dipecat setelah operasi awal.

Ayato has a face-to-face encounter with Mishima who reveals her true purpose for showing herself to him. (Source: HIDIVE) Makoto, after firing Haruka from the organization on behalf of Ayato's recent acts of theft, orders the operation to start one hour sooner than scheduled. When the operation commences, the barrier has been diminished. During this time, Ayato vigorously paints a portrait of Reika, while Quon passionately plays the piano having Ayato on her mind. Ixtli appears before Ayato and Quon in these forms in order to help them enter the tuning into her. Though Quon accepts to enter the tuning, Ayato rejects to do so. Souichi dismisses Makoto from his position as organization commander and federation observer for having undergone the operation with being permitted by the federation. Quon has now been awakened as the black egg begins to hatch, while Ayato encases the RahXephon in the white egg. (Source: Wikipedia)
Episode
- Ep. 18 · Ayato dan Hiroko melarikan diri dari Tokyo Jupiter setelah pertempuran RahXephon melawan Dolem Falsetto
- Ep. 19 · Ayato melarikan diri dari Tokyo Jupiter sambil menghadapi trauma akibat kejaran Vibrato dan Futagami
- Ep. 20 · Ayato kembali ke TERRA di bawah Isshiki sementara Mamoru bertemu kembali dengan Ayato dan Megumi setelah melarikan diri dari Tokyo.
- Ep. 21 · Pengambilalihan TERRA oleh Isshiki meregangkan hubungan saat Mamoru mengungkap masa lalu Hiroko dan rahasia Ayato.
- Ep. 22 · Ayato dan Quon menghadapi Ixtli sementara Makoto dipecat setelah operasi awal.
- Ep. 23 · Mulian memaksa RahXephon menyerah sementara Kunugi tertinggal untuk mengaktifkan perangkat sistem Jupiter
- Ep. 24 · Ayato Memilih Jalurnya di Tengah Pertempuran Antara Pasukan TERRA dan Mulian
- Ep. 25 · Ayato dan Quon mengungkap hubungan mereka saat RahXephon terbelah di tengah kehancuran kota.
- Ep. 26 · Konfrontasi terakhir antara True Xephons berakhir dengan Ayato memulihkan dunia untuk bersatu kembali dengan Haruka.