Ep. 25: Dr. Ochanomizu and Atom attend Deep City's inauguration while facing a fabricated environmental system.

Dr. Ochanomizu and Atom attend the inauguration of Deep City, an underground metropolis designed to preserve the surface environment. The city’s creator, Dr. Sebastian, discovers that the essential environmental restoration system is a fake. Mayor Manny, prioritizing honor over budget, withheld funds for this critical infrastructure. Upon being imprisoned for exposing the fraud, Dr. Sebastian releases Chemical A, a plant growth formula, to halt the city’s operation and prevent planetary pollution. This action causes trees to mutate into monstrous entities that attack the inhabitants. Atom attempts to rescue fleeing citizens, but the rampaging flora overwhelms his efforts. He must urgently devise a method to stop the accelerated tree growth and save the people trapped within the city.
Episodes
- Ep. 21 · Yuuko and Atom investigate Dragon Lake for illegal dumping and environmental destruction.
- Ep. 22 · Princess Kaya Disguised by Atom and Friends Before Gang Capture
- Ep. 23 · Atom loses memory after saving Earth from falling satellite Ashura
- Ep. 24 · Micro Bears descend upon the town, isolating residents with comforting illusions created by Shadow.
- Ep. 25 · Dr. Ochanomizu and Atom attend Deep City's inauguration while facing a fabricated environmental system.
- Ep. 26 · Atom is framed for planting a wormhole projector on the Minerva airship while Katari's team targets robots.
- Ep. 27 · Detective Higeoyaji and Atom investigate a locked-room mystery involving Skunk and the magnetic robot Gadem.
- Ep. 28 · Robots trapped in exploding plant while humans refuse rescue
- Ep. 29 · Uran and the Famous Detective / The Case of the Phantom Fowl